Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930334.1_cds_XP_016477387.1_69125
CDS Infomation

[gene=LOC107798872] [db_xref=GeneID:107798872] [protein=copper-transporting ATPase RAN1-like] [protein_id=XP_016477387.1] [location=join(23367..23636,25988..26602,26882..27311,27418..27743,28275..28333,28435..28777,29540..29740,29847..30104,30676..31152)] [gbkey=CDS]
Sequence

ATGACACCGAGCATGAGGGACGTCCAGTTAACGGAGGTTGCCGGAGACGGTGCCGGAGAG
GAAGTGAGGCTGTTGGATTCATATGACGAAGAAGAACAGAAATTGGGTGACAATTTGAGG
AGAATTCAGGTTAGAGTAACGGGGATGACGTGTGCAGCTTGTTCTAACTCAGTGGAAGGA
GCTTTGATGAGCATAAATGGTGTTGTTAAGGCTACTGTTGCTTTGCTTCAGAATAAGGCT
GACGTCATTTTTTATCCTAGCTTGGTCAAGGATGATGAGATTACAAATGCTATAGAAGAT
GCTGGGTTTGAGGCAGAGCTTCTTTCAGAACCTACTGCATCTCGTACAAACCCACATGGA
ACTGTAGTAGGCCAGTTCATAATAGGTGGTATGACATGTGCAGCTTGTGTAAATTCTGTT
GAAGGTATCCTAAAACAGCTCCCAGGTGTACGAAAGGCCGTAGTTGCTTTGGCTACATCA
CTAGGAGAGGTTGAATATGATCCGTCCATAATCAGCAAGGATGATATAGCGAGTGCAATT
GAAGATGCTGGTTTTGAAGCTTCCTTTGTGCAGAGCAGCGAGCAGGATAAAATTGTACTT
GGGGTGGTTGGTATTTCTGGTGAGATGGATGCACAGTTGTTAGAAGGCATTCTTTCGAAG
CTGCATGGAGTTAAACACTTTTTATTTGATCGGGTATCATGTGAGCTTGGAGTTGTCTTT
GATCCCGAAGTTCTTGGCCCAAGATCTTTAGTTGATGGCGTTGAAGGAGGAAGCAGCGGC
AAGTTTAAGTTACTTGTCAAGAACCCGTATACAAGAATGGCTTCCAGAGATTTAGAAGAA
TCCTCGAAGATGTTTCGGCTTTTTACTGCAAGCTTATCTCTAAGTGTTCCTGTGATTCTA
ATGCGAGTTGTCTGCCCTCAGATACCTCTGCTCTATGCTTTACTGATTTGGCAGTGTGGT
CCCTTTCAAATGGGTGATTGGTTAAAGTGGGCTTTAGTGACTGTTGTCCAATTTGGTATT
GGTAAACGTTTTTATGTTGCGGCTGGAAGAGCACTTCGAAATGGTTCCACAAACATGGAT
GTCTTGGTTGCGTTGGGAACTACAGCTTCCTATGTTTACTCTGTATGTGCACTACTTTAT
GGTGCAATTTCTGGGTTCTGGTCTCCAACATACTTTGAAACAAGTGCCATGTTAATCACA
TTTGTACTTCTAGGAAAGTACTTGGAAACTCTTGCTAAAGGAAAGACATCTGGTGCTATC
AAAAAACTCGTAGAACTCGCTCCCGCTACAGCTATACTGCTTGTCAAAGACAAAGGTGGA
AAAGTAGTTGGAGAAAGAGAAATAGATGCTTTATTGATTCAGGCTGGTGATATATTAAAA
GTACTTCCTGGTACAAAAGTTCCTGTGGATGGTGTCGTTGTATGGGGTTCAAGCCATGTG
AATGAGAGTATGGTCACTGGAGAATCTGCTCCTGTTTTGAAAGAGATTAATTCAGTGGTT
ATTGGAGGTACAATCAATTTACATGGTTCTCTTCACATACAGGCCACAAAAGTAGGGTCA
AACACAGTTCTTAGTCAGATCATATCTCTTGTTGAGACAGCACAGATGTCAAAGGCTCCC
ATTCAGAAGTTCGCCGACTACATTGCAAGCATTTTTGTTCCTGTGGTTGTTACTATGTCC
TTATTGACATTCTTTGGATGGTATGTTGCTGGAGTTCTTGGAGGCTATCCAGAAGAATGG
CTGCCAGAAAATGGCAATTTTTTTGTATTTTCTTTGATGTTTGCGATATCAGTTGTGGTT
ATTGCATGTCCTTGTGCACTTGGTTTGGCCACCCCCACTGCTGTTATGGTTGCGACAGGG
GTTGGTGCCAACAACGGTGTGCTGATAAAGGGAGGAGATGCATTGGAGATGGCGCAGAAG
ATTAGATATGTGATATTTGATAAGACAGGCACTTTGACCCAGGGAAAAGCTAAAGTCACA
ACAGCCAAAGTTTTCACTGAGATGGATCGTGGAGAATTCCTAACTTTGGTAGCTTCTGCA
GAGGCAAGCAGTGAACACCCCTTGGCTAAAGCGATAATGGAATATGCTCGGCATTTTCAT
TTCTTTGATGAACCATCTGATACCGGGGAGTTTCAGAGTTACAGTGAACAGGCTAAGTTT
TCTGGATGGCTTCAAGATGTATCAGATTTCTCTGTTTTGCCTGGAAAAGGTGTACAGTGC
TTCATCGATGGGAAATGGGTTTTGATTGGTAACCGGAAGCTGCTTACCGAGAATGGGATA
GCTATACCTTCCAACGTAGAGAATTTTGTTGTAGAGTTGGAAGAAAGTGCAAAGACAGGC
ATTCTTGTCGCTCAGGATAATGTTGTAATTGGTGCTCTGGGGATAGCAGACCCGCTAAAG
AGAGAAGCGGCTGTTGTCGTAGAGGGCCTTATAAAAATGGGCGTCCAACCAATCATGGTT
ACTGGTGATAATTGGAGAACAGCTCGTGCAGTTGCTAAGGAGGTCGGTATCCATGACGTA
AGAGCAGAAGTGTTGCCAGCAGGAAAAGCTGAGGTCATCCGTTCATTTCAAAAGGGAGGC
AGTGTAGTTGCTATGGTAGGTGATGGGATCAATGACTCACCCGCATTAGCTGCTGCAGAT
GTTGGTATGGCAATTGGAGCGGGAACTGATATTGCGATAGAAGCTGCTGAGTACGTGTTA
ATGAGAAGCAACTTGGAGGATGTGATTACTGCCATAGACCTCTCAAGGAAGACATTTGCG
CGGATTAGGTGGAATTATATCTTTGCCATGGCGTACAATGTGATCGCAATTCCAGTGGCC
GCAGGAGTTTTCTTTCCTTTGTTAAGACTGGAGTTGCCACCTTGGGTAGCTGGTGCATGC
ATGGCAATGTCATCTGTAAGTGTTGTGTGTTCTTCTTTGTATCTAAAGAGATACAAGAAA
CCCAGACTTACCACTATATTGGAAATAACTATAGAGTAG

Peptide Sequence

PEP ID

XP_016477387.1
PEP Infomation

PREDICTED: copper-transporting ATPase RAN1-like [Nicotiana tabacum]
Sequence

MTPSMRDVQLTEVAGDGAGEEVRLLDSYDEEEQKLGDNLRRIQVRVTGMTCAACSNSVEG
ALMSINGVVKATVALLQNKADVIFYPSLVKDDEITNAIEDAGFEAELLSEPTASRTNPHG
TVVGQFIIGGMTCAACVNSVEGILKQLPGVRKAVVALATSLGEVEYDPSIISKDDIASAI
EDAGFEASFVQSSEQDKIVLGVVGISGEMDAQLLEGILSKLHGVKHFLFDRVSCELGVVF
DPEVLGPRSLVDGVEGGSSGKFKLLVKNPYTRMASRDLEESSKMFRLFTASLSLSVPVIL
MRVVCPQIPLLYALLIWQCGPFQMGDWLKWALVTVVQFGIGKRFYVAAGRALRNGSTNMD
VLVALGTTASYVYSVCALLYGAISGFWSPTYFETSAMLITFVLLGKYLETLAKGKTSGAI
KKLVELAPATAILLVKDKGGKVVGEREIDALLIQAGDILKVLPGTKVPVDGVVVWGSSHV
NESMVTGESAPVLKEINSVVIGGTINLHGSLHIQATKVGSNTVLSQIISLVETAQMSKAP
IQKFADYIASIFVPVVVTMSLLTFFGWYVAGVLGGYPEEWLPENGNFFVFSLMFAISVVV
IACPCALGLATPTAVMVATGVGANNGVLIKGGDALEMAQKIRYVIFDKTGTLTQGKAKVT
TAKVFTEMDRGEFLTLVASAEASSEHPLAKAIMEYARHFHFFDEPSDTGEFQSYSEQAKF
SGWLQDVSDFSVLPGKGVQCFIDGKWVLIGNRKLLTENGIAIPSNVENFVVELEESAKTG
ILVAQDNVVIGALGIADPLKREAAVVVEGLIKMGVQPIMVTGDNWRTARAVAKEVGIHDV
RAEVLPAGKAEVIRSFQKGGSVVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAAEYVL
MRSNLEDVITAIDLSRKTFARIRWNYIFAMAYNVIAIPVAAGVFFPLLRLELPPWVAGAC
MAMSSVSVVCSSLYLKRYKKPRLTTILEITIE

Transcript Sequence

Gene sequence data has not been registered.